Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Mir6977-201ENSMUST00000184960 64 ntBASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Prpf39Q8K2Z2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Gm31326-201ENSMUST00000191856 1048 ntBASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Gm44855-201ENSMUST00000205725 362 ntBASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Prpf39Q8K2Z2 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Gm42612-201ENSMUST00000197986 623 ntBASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Gm43170-201ENSMUST00000199827 612 ntBASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.17□□□□□ -0.14
Prpf39Q8K2Z2 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Prpf39Q8K2Z2 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms