Protein–RNA interactions for Protein: Q8CI51

Pdlim5, PDZ and LIM domain protein 5, mousemouse

Known RBP Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5Q8CI51 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Gm12585-201ENSMUST00000117307 290 ntBASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Gm25948-201ENSMUST00000175334 112 ntBASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Fgf17-202ENSMUST00000227123 1336 ntBASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Pdlim5Q8CI51 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim5Q8CI51 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.39
Pdlim5Q8CI51 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim5Q8CI51 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim5Q8CI51 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Pdlim5Q8CI51 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Gm14701-201ENSMUST00000117156 348 ntBASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Gm15393-201ENSMUST00000120499 219 ntBASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Gm10766-202ENSMUST00000194123 606 ntBASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Pdlim5Q8CI51 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pdlim5Q8CI51 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim5Q8CI51 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pdlim5Q8CI51 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms