Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Gm29608-201ENSMUST00000190444 463 ntBASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Gm8598-201ENSMUST00000221184 836 ntBASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Tmem54-202ENSMUST00000030577 988 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Rab11fip3Q8CHD8 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Proscos-202ENSMUST00000178990 666 ntBASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Rab11fip3Q8CHD8 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 AC139350.1-201ENSMUST00000227064 1594 ntBASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Gm14660-201ENSMUST00000119809 575 ntBASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Gm11400-201ENSMUST00000120853 1214 ntBASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Gm45841-201ENSMUST00000207700 164 ntBASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 AC166349.1-201ENSMUST00000220866 695 ntBASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Rab11fip3Q8CHD8 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Gm12742-201ENSMUST00000117326 410 ntBASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Gm12384-201ENSMUST00000119228 919 ntBASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Gm27731-201ENSMUST00000185192 107 ntBASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Gm43818-201ENSMUST00000200605 466 ntBASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Gm9299-201ENSMUST00000206392 1140 ntBASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 CT573086.1-201ENSMUST00000227202 1074 ntBASIC17.61■□□□□ 0.41
Rab11fip3Q8CHD8 Gm9899-201ENSMUST00000065519 555 ntBASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms