Protein–RNA interactions for Protein: Q8CCJ3

Ufl1, E3 UFM1-protein ligase 1, mousemouse

Known RBP Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ufl1Q8CCJ3 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Gm22331-201ENSMUST00000158066 136 ntBASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Gm27731-201ENSMUST00000185192 107 ntBASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Gm9899-201ENSMUST00000065519 555 ntBASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Gm9755-201ENSMUST00000032981 1356 ntBASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Gm9917-201ENSMUST00000180865 5192 ntTSL 3 BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Ufl1Q8CCJ3 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC16.34■□□□□ 0.21
Ufl1Q8CCJ3 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ufl1Q8CCJ3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC16.33■□□□□ 0.21
Ufl1Q8CCJ3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Ufl1Q8CCJ3 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC16.33■□□□□ 0.21
Ufl1Q8CCJ3 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC16.33■□□□□ 0.21
Ufl1Q8CCJ3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ufl1Q8CCJ3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Ufl1Q8CCJ3 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Gm12742-201ENSMUST00000117326 410 ntBASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 AC155237.1-201ENSMUST00000226196 1279 ntBASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Ufl1Q8CCJ3 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Ufl1Q8CCJ3 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms