Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.4□□□□□ -0.1
Uba3Q8C878 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC14.4□□□□□ -0.1
Uba3Q8C878 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Hist1h2br-202ENSMUST00000110476 381 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Uba3Q8C878 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.4□□□□□ -0.1
Uba3Q8C878 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.4□□□□□ -0.1
Uba3Q8C878 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Uba3Q8C878 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Gm28631-201ENSMUST00000190740 334 ntBASIC14.4□□□□□ -0.1
Uba3Q8C878 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.4□□□□□ -0.1
Uba3Q8C878 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.4□□□□□ -0.1
Uba3Q8C878 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Uba3Q8C878 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Uba3Q8C878 Gm44291-201ENSMUST00000203102 2865 ntBASIC14.4□□□□□ -0.1
Uba3Q8C878 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Uba3Q8C878 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.4□□□□□ -0.1
Uba3Q8C878 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.39□□□□□ -0.11
Uba3Q8C878 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.39□□□□□ -0.11
Uba3Q8C878 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Gm5354-201ENSMUST00000182417 973 ntBASIC14.39□□□□□ -0.11
Uba3Q8C878 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.39□□□□□ -0.11
Uba3Q8C878 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Uba3Q8C878 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Uba3Q8C878 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Uba3Q8C878 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Uba3Q8C878 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC14.39□□□□□ -0.11
Uba3Q8C878 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Uba3Q8C878 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Uba3Q8C878 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Uba3Q8C878 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.38□□□□□ -0.11
Uba3Q8C878 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.38□□□□□ -0.11
Uba3Q8C878 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Gm27772-201ENSMUST00000184900 187 ntBASIC14.38□□□□□ -0.11
Uba3Q8C878 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Uba3Q8C878 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.38□□□□□ -0.11
Uba3Q8C878 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.38□□□□□ -0.11
Uba3Q8C878 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Uba3Q8C878 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
Uba3Q8C878 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Uba3Q8C878 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Uba3Q8C878 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC14.38□□□□□ -0.11
Uba3Q8C878 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Uba3Q8C878 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms