Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.13■□□□□ 0.01
Trim47Q8C0E3 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 AC132467.2-202ENSMUST00000227726 559 ntBASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trim47Q8C0E3 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm38391-201ENSMUST00000191720 4069 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm12537-201ENSMUST00000119266 1002 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm12070-201ENSMUST00000119551 1002 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm12671-201ENSMUST00000119978 1002 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm13292-201ENSMUST00000120014 1000 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm15806-201ENSMUST00000120696 955 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm12403-201ENSMUST00000121384 959 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm10359-201ENSMUST00000180167 1002 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm12033-201ENSMUST00000180654 1002 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm5559-201ENSMUST00000180755 1002 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm4335-201ENSMUST00000182581 1004 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gm32390-201ENSMUST00000212713 1172 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 AC153937.1-201ENSMUST00000218734 412 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Trim34b-201ENSMUST00000106847 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trim47Q8C0E3 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm21156-201ENSMUST00000189693 869 ntBASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm38223-201ENSMUST00000194484 695 ntBASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm5276-201ENSMUST00000196683 1047 ntBASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm42550-201ENSMUST00000201553 960 ntBASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm44719-201ENSMUST00000206404 149 ntBASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm8463-201ENSMUST00000208573 613 ntBASIC15.11■□□□□ 0.01
Trim47Q8C0E3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.11■□□□□ 0.01
Trim47Q8C0E3 Gm5035-201ENSMUST00000215581 927 ntBASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms