Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm12403-201ENSMUST00000121384 959 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm15429-201ENSMUST00000151268 798 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Nup54Q8BTS4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Gm42550-201ENSMUST00000201553 960 ntBASIC13.96□□□□□ -0.17
Nup54Q8BTS4 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC13.96□□□□□ -0.17
Nup54Q8BTS4 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Nup54Q8BTS4 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nup54Q8BTS4 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup54Q8BTS4 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup54Q8BTS4 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup54Q8BTS4 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup54Q8BTS4 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup54Q8BTS4 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Nup54Q8BTS4 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.96□□□□□ -0.18
Nup54Q8BTS4 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Nup54Q8BTS4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Gm15371-201ENSMUST00000117057 784 ntBASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Gm13886-201ENSMUST00000117876 1183 ntBASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Gm38144-201ENSMUST00000192790 465 ntBASIC13.95□□□□□ -0.18
Nup54Q8BTS4 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Gm45059-201ENSMUST00000205558 1077 ntBASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Gm6983-201ENSMUST00000214912 628 ntBASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Nup54Q8BTS4 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nup54Q8BTS4 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Nup54Q8BTS4 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms