Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Gm11405-201ENSMUST00000118689 1556 ntBASIC13.23□□□□□ -0.29
Cpne3Q8BT60 AC114543.1-201ENSMUST00000226451 1558 ntBASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Cpne3Q8BT60 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Gm6415-201ENSMUST00000118488 348 ntBASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Gm16476-201ENSMUST00000221544 139 ntBASIC13.22□□□□□ -0.29
Cpne3Q8BT60 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.22□□□□□ -0.29
Cpne3Q8BT60 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Cpne3Q8BT60 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Mir1897-201ENSMUST00000122581 272 ntBASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Gm27702-201ENSMUST00000184512 56 ntBASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Gm5312-201ENSMUST00000203728 547 ntBASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.21□□□□□ -0.29
Cpne3Q8BT60 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpne3Q8BT60 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.21□□□□□ -0.3
Cpne3Q8BT60 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpne3Q8BT60 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.21□□□□□ -0.3
Cpne3Q8BT60 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Cpne3Q8BT60 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.21□□□□□ -0.3
Cpne3Q8BT60 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
Cpne3Q8BT60 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
Cpne3Q8BT60 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Cpne3Q8BT60 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms