Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Gm4875-201ENSMUST00000118257 786 ntBASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Gm14719-201ENSMUST00000121891 340 ntBASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.28□□□□□ -0.28
Cpsf4Q8BQZ5 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf4Q8BQZ5 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf4Q8BQZ5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.27□□□□□ -0.28
Cpsf4Q8BQZ5 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf4Q8BQZ5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.27□□□□□ -0.28
Cpsf4Q8BQZ5 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
Cpsf4Q8BQZ5 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cpsf4Q8BQZ5 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Gm2423-201ENSMUST00000074863 733 ntBASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cpsf4Q8BQZ5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Mir6977-201ENSMUST00000184960 64 ntBASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 AC132863.2-201ENSMUST00000226643 799 ntBASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 CT025535.1-201ENSMUST00000227172 491 ntBASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cpsf4Q8BQZ5 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Cpsf4Q8BQZ5 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58 ms