Protein–RNA interactions for Protein: Q8BKA3

Srrm4, Serine/arginine repetitive matrix protein 4, mousemouse

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm4Q8BKA3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Gm6912-201ENSMUST00000117218 544 ntBASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 AC149294.4-201ENSMUST00000227870 882 ntBASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Hist1h2bq-201ENSMUST00000078156 381 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Gm42690-201ENSMUST00000197921 1836 ntBASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC11.86□□□□□ -0.51
Srrm4Q8BKA3 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Ldb3-207ENSMUST00000227819 1499 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Gm20632-201ENSMUST00000176760 2427 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Gm8927-201ENSMUST00000181978 981 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Gm28760-201ENSMUST00000185995 736 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Gm31326-201ENSMUST00000191856 1048 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Gm3222-201ENSMUST00000071282 990 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Mir497b-201ENSMUST00000093601 125 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Acot6-202ENSMUST00000222921 3622 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.85□□□□□ -0.51
Srrm4Q8BKA3 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm37861-201ENSMUST00000193534 2869 ntBASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm15240-201ENSMUST00000118156 720 ntBASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm13385-201ENSMUST00000121089 220 ntBASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Srrm4Q8BKA3 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms