Protein–RNA interactions for Protein: Q8BI41

Synb, Syncytin-B, mousemouse

Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynbQ8BI41 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
SynbQ8BI41 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.1□□□□□ -0.31
SynbQ8BI41 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.1□□□□□ -0.31
SynbQ8BI41 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Gm45667-201ENSMUST00000210380 1316 ntBASIC13.1□□□□□ -0.31
SynbQ8BI41 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Gm45638-201ENSMUST00000211507 2878 ntBASIC13.1□□□□□ -0.31
SynbQ8BI41 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SynbQ8BI41 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.09□□□□□ -0.31
SynbQ8BI41 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.09□□□□□ -0.31
SynbQ8BI41 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.09□□□□□ -0.31
SynbQ8BI41 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Gm7558-201ENSMUST00000193221 1165 ntBASIC13.09□□□□□ -0.31
SynbQ8BI41 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Gm5425-201ENSMUST00000214125 459 ntBASIC13.09□□□□□ -0.31
SynbQ8BI41 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC13.09□□□□□ -0.31
SynbQ8BI41 AC155252.1-201ENSMUST00000226462 1208 ntBASIC13.09□□□□□ -0.31
SynbQ8BI41 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SynbQ8BI41 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.09□□□□□ -0.31
SynbQ8BI41 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.09□□□□□ -0.31
SynbQ8BI41 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.09□□□□□ -0.31
SynbQ8BI41 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SynbQ8BI41 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SynbQ8BI41 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SynbQ8BI41 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.08□□□□□ -0.32
SynbQ8BI41 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SynbQ8BI41 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SynbQ8BI41 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Gm4984-201ENSMUST00000115987 360 ntBASIC13.08□□□□□ -0.32
SynbQ8BI41 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.08□□□□□ -0.32
SynbQ8BI41 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
SynbQ8BI41 Mir7654-201ENSMUST00000185082 70 ntBASIC13.08□□□□□ -0.32
SynbQ8BI41 Gm43630-201ENSMUST00000201550 776 ntBASIC13.08□□□□□ -0.32
SynbQ8BI41 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.08□□□□□ -0.32
SynbQ8BI41 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.08□□□□□ -0.32
SynbQ8BI41 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Carlr-201ENSMUST00000181515 2574 ntBASIC13.08□□□□□ -0.32
SynbQ8BI41 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SynbQ8BI41 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SynbQ8BI41 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms