Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Crhr2-208ENSMUST00000212633 2041 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Gm9385-201ENSMUST00000117563 472 ntBASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Gm29741-201ENSMUST00000192667 421 ntBASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 AC121598.1-201ENSMUST00000228224 1019 ntBASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Gm7461-201ENSMUST00000058918 827 ntBASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Rps4l-201ENSMUST00000071745 943 ntBASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Tepsin-201ENSMUST00000026442 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Slc5a7Q8BGY9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Slc5a7Q8BGY9 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Slc5a7Q8BGY9 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Slc5a7Q8BGY9 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Slc5a7Q8BGY9 Gm17435-202ENSMUST00000212699 1998 ntBASIC11.96□□□□□ -0.5
Slc5a7Q8BGY9 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Slc5a7Q8BGY9 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Slc5a7Q8BGY9 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Slc5a7Q8BGY9 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Gm11873-201ENSMUST00000117877 1304 ntBASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Gm5177-201ENSMUST00000183092 997 ntBASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Slc5a7Q8BGY9 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Pck2-205ENSMUST00000226352 2784 ntBASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Hoxb8-203ENSMUST00000168043 1141 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Slc5a7Q8BGY9 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms