Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Gm37411-201ENSMUST00000194180 2282 ntBASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Gm15236-201ENSMUST00000117309 379 ntBASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Gm6283-201ENSMUST00000182369 1000 ntBASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Gm37466-201ENSMUST00000195692 652 ntBASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Prpf40bQ80W14 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Gm26513-201ENSMUST00000181802 2489 ntBASIC15.77■□□□□ 0.11
Prpf40bQ80W14 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.77■□□□□ 0.11
Prpf40bQ80W14 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Gm12384-201ENSMUST00000119228 919 ntBASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Gm4804-201ENSMUST00000182234 999 ntBASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Gm18054-201ENSMUST00000207539 555 ntBASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Prpf40bQ80W14 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Gm38100-201ENSMUST00000194391 1329 ntAPPRIS ALT2 BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Gm16570-201ENSMUST00000161951 436 ntBASIC15.75■□□□□ 0.11
Prpf40bQ80W14 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 AC123645.1-201ENSMUST00000228469 605 ntBASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Gm17383-201ENSMUST00000078739 1041 ntBASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Prpf40bQ80W14 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms