Protein–RNA interactions for Protein: Q7M729

Scn4b, Sodium channel subunit beta-4, mousemouse

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4bQ7M729 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Scn4bQ7M729 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Gm6912-201ENSMUST00000117218 544 ntBASIC13.32□□□□□ -0.28
Scn4bQ7M729 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Auts2-212ENSMUST00000178555 309 ntBASIC13.32□□□□□ -0.28
Scn4bQ7M729 Mir8102-201ENSMUST00000184148 139 ntBASIC13.32□□□□□ -0.28
Scn4bQ7M729 Gm5425-201ENSMUST00000214125 459 ntBASIC13.32□□□□□ -0.28
Scn4bQ7M729 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.32□□□□□ -0.28
Scn4bQ7M729 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.32□□□□□ -0.28
Scn4bQ7M729 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.32□□□□□ -0.28
Scn4bQ7M729 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.32□□□□□ -0.28
Scn4bQ7M729 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Scn4bQ7M729 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Gm24420-201ENSMUST00000176676 59 ntBASIC13.31□□□□□ -0.28
Scn4bQ7M729 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.31□□□□□ -0.28
Scn4bQ7M729 Mir7684-201ENSMUST00000183858 60 ntBASIC13.31□□□□□ -0.28
Scn4bQ7M729 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.31□□□□□ -0.28
Scn4bQ7M729 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Scn4bQ7M729 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 156.1 ms