Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Gm7584-201ENSMUST00000175829 940 ntBASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Gm38266-201ENSMUST00000194931 421 ntBASIC15.84■□□□□ 0.13
Nup98Q6PFD9 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Nup98Q6PFD9 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nup98Q6PFD9 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nup98Q6PFD9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC15.83■□□□□ 0.13
Nup98Q6PFD9 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nup98Q6PFD9 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nup98Q6PFD9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nup98Q6PFD9 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Nup98Q6PFD9 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Nup98Q6PFD9 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Gm13342-201ENSMUST00000121055 207 ntBASIC15.83■□□□□ 0.12
Nup98Q6PFD9 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Gm43134-201ENSMUST00000199434 1886 ntBASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Nup98Q6PFD9 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Mt3-203ENSMUST00000211930 477 ntTSL 2 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Gm13297-201ENSMUST00000120205 934 ntBASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Sybu-209ENSMUST00000228639 4113 ntBASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Nup98Q6PFD9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Gm5637-201ENSMUST00000153890 1119 ntBASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Nup98Q6PFD9 AC135669.1-202ENSMUST00000216742 540 ntBASIC15.81■□□□□ 0.12
Nup98Q6PFD9 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.3 ms