Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 AC167669.2-201ENSMUST00000224417 1620 ntBASIC12.64□□□□□ -0.39
AtmQ62388 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.64□□□□□ -0.39
AtmQ62388 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AtmQ62388 Olfr1414-202ENSMUST00000189174 1159 ntAPPRIS P1 TSL 3 BASIC12.64□□□□□ -0.39
AtmQ62388 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.64□□□□□ -0.39
AtmQ62388 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.64□□□□□ -0.39
AtmQ62388 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 Gm37827-201ENSMUST00000194486 1542 ntBASIC12.64□□□□□ -0.39
AtmQ62388 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AtmQ62388 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AtmQ62388 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
AtmQ62388 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
AtmQ62388 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC12.63□□□□□ -0.39
AtmQ62388 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC12.63□□□□□ -0.39
AtmQ62388 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
AtmQ62388 Gm5950-201ENSMUST00000213337 772 ntBASIC12.63□□□□□ -0.39
AtmQ62388 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
AtmQ62388 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.63□□□□□ -0.39
AtmQ62388 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.63□□□□□ -0.39
AtmQ62388 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12.63□□□□□ -0.39
AtmQ62388 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
AtmQ62388 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Gm7003-201ENSMUST00000195089 312 ntBASIC12.63□□□□□ -0.39
AtmQ62388 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC12.63□□□□□ -0.39
AtmQ62388 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC12.63□□□□□ -0.39
AtmQ62388 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.63□□□□□ -0.39
AtmQ62388 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC12.63□□□□□ -0.39
AtmQ62388 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.63□□□□□ -0.39
AtmQ62388 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
AtmQ62388 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Pgbd5-203ENSMUST00000136892 1739 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
AtmQ62388 Urad-201ENSMUST00000100433 766 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.63□□□□□ -0.39
AtmQ62388 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.63□□□□□ -0.39
AtmQ62388 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Ccdc28a-202ENSMUST00000080860 1190 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AtmQ62388 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC12.62□□□□□ -0.39
AtmQ62388 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.62□□□□□ -0.39
AtmQ62388 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.62□□□□□ -0.39
AtmQ62388 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.62□□□□□ -0.39
AtmQ62388 4732440D04Rik-202ENSMUST00000159618 413 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Gm37042-201ENSMUST00000193816 581 ntBASIC12.62□□□□□ -0.39
AtmQ62388 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC12.62□□□□□ -0.39
AtmQ62388 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Gm15897-201ENSMUST00000117770 1486 ntBASIC12.62□□□□□ -0.39
AtmQ62388 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC12.62□□□□□ -0.39
AtmQ62388 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.62□□□□□ -0.39
AtmQ62388 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.62□□□□□ -0.39
AtmQ62388 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.62□□□□□ -0.39
AtmQ62388 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AtmQ62388 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
AtmQ62388 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC12.61□□□□□ -0.39
AtmQ62388 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
AtmQ62388 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
AtmQ62388 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms