Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm15940-201ENSMUST00000156011 817 ntTSL 3 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm16337-201ENSMUST00000160368 917 ntTSL 3 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Mir7684-201ENSMUST00000183858 60 ntBASIC10.2□□□□□ -0.78
Foxc1Q61572 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm38294-201ENSMUST00000192831 381 ntBASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm10297-201ENSMUST00000207136 651 ntBASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm44554-201ENSMUST00000208738 147 ntBASIC10.2□□□□□ -0.78
Foxc1Q61572 Gm45453-201ENSMUST00000211758 853 ntBASIC10.2□□□□□ -0.78
Foxc1Q61572 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC10.2□□□□□ -0.78
Foxc1Q61572 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC10.2□□□□□ -0.78
Foxc1Q61572 AC140375.2-201ENSMUST00000225283 584 ntBASIC10.2□□□□□ -0.78
Foxc1Q61572 Nupl1-207ENSMUST00000225311 2475 ntBASIC10.2□□□□□ -0.78
Foxc1Q61572 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Acyp1-201ENSMUST00000008966 648 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC10.2□□□□□ -0.78
Foxc1Q61572 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Carlr-201ENSMUST00000181515 2574 ntBASIC10.2□□□□□ -0.78
Foxc1Q61572 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Foxc1Q61572 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC10.19□□□□□ -0.78
Foxc1Q61572 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Tnf-201ENSMUST00000025263 1639 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Gm15061-201ENSMUST00000121076 1046 ntBASIC10.19□□□□□ -0.78
Foxc1Q61572 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC10.19□□□□□ -0.78
Foxc1Q61572 Gm27631-201ENSMUST00000184163 466 ntBASIC10.19□□□□□ -0.78
Foxc1Q61572 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Gm43906-201ENSMUST00000203194 906 ntBASIC10.19□□□□□ -0.78
Foxc1Q61572 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Foxc1Q61572 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC10.19□□□□□ -0.78
Foxc1Q61572 CT025642.1-201ENSMUST00000224734 1219 ntBASIC10.19□□□□□ -0.78
Foxc1Q61572 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Mbnl2-204ENSMUST00000227012 2390 ntBASIC10.19□□□□□ -0.78
Foxc1Q61572 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Foxc1Q61572 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Foxc1Q61572 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms