Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm13886-201ENSMUST00000117876 1183 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm12537-201ENSMUST00000119266 1002 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm12070-201ENSMUST00000119551 1002 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm12671-201ENSMUST00000119978 1002 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm13292-201ENSMUST00000120014 1000 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm12403-201ENSMUST00000121384 959 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm10359-201ENSMUST00000180167 1002 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm12033-201ENSMUST00000180654 1002 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm5559-201ENSMUST00000180755 1002 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm4335-201ENSMUST00000182581 1004 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm5276-201ENSMUST00000196683 1047 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Smarcd1Q61466 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.21□□□□□ -0.13
Smarcd1Q61466 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Smarcd1Q61466 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Smarcd1Q61466 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd1Q61466 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Smarcd1Q61466 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcd1Q61466 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.2□□□□□ -0.14
Smarcd1Q61466 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Smarcd1Q61466 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Gm8775-201ENSMUST00000170943 1327 ntBASIC14.19□□□□□ -0.14
Smarcd1Q61466 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Gm29608-201ENSMUST00000190444 463 ntBASIC14.19□□□□□ -0.14
Smarcd1Q61466 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Smarcd1Q61466 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcd1Q61466 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd1Q61466 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd1Q61466 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Smarcd1Q61466 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Smarcd1Q61466 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd1Q61466 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Smarcd1Q61466 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 60.6 ms