Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.35□□□□□ -0.27
Vsx2Q61412 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.35□□□□□ -0.27
Vsx2Q61412 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.35□□□□□ -0.27
Vsx2Q61412 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Vsx2Q61412 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.35□□□□□ -0.27
Vsx2Q61412 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.35□□□□□ -0.27
Vsx2Q61412 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.35□□□□□ -0.27
Vsx2Q61412 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
Vsx2Q61412 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vsx2Q61412 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
Vsx2Q61412 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Vsx2Q61412 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.35□□□□□ -0.27
Vsx2Q61412 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Gm6263-201ENSMUST00000120029 1342 ntBASIC13.35□□□□□ -0.27
Vsx2Q61412 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Vsx2Q61412 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.34□□□□□ -0.27
Vsx2Q61412 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Vsx2Q61412 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Gm12585-201ENSMUST00000117307 290 ntBASIC13.34□□□□□ -0.27
Vsx2Q61412 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.34□□□□□ -0.27
Vsx2Q61412 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Gm5866-201ENSMUST00000177881 973 ntBASIC13.34□□□□□ -0.27
Vsx2Q61412 Gm9522-201ENSMUST00000182394 926 ntBASIC13.34□□□□□ -0.27
Vsx2Q61412 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 AC153872.1-201ENSMUST00000199539 128 ntBASIC13.34□□□□□ -0.27
Vsx2Q61412 Gm44855-201ENSMUST00000205725 362 ntBASIC13.34□□□□□ -0.27
Vsx2Q61412 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Gm7730-201ENSMUST00000212486 454 ntBASIC13.34□□□□□ -0.27
Vsx2Q61412 Gm18027-201ENSMUST00000218947 619 ntBASIC13.34□□□□□ -0.27
Vsx2Q61412 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.34□□□□□ -0.27
Vsx2Q61412 Gm2423-201ENSMUST00000074863 733 ntBASIC13.34□□□□□ -0.27
Vsx2Q61412 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC13.34□□□□□ -0.27
Vsx2Q61412 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Vsx2Q61412 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vsx2Q61412 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Vsx2Q61412 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Vsx2Q61412 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.33□□□□□ -0.27
Vsx2Q61412 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vsx2Q61412 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.33□□□□□ -0.28
Vsx2Q61412 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.33□□□□□ -0.28
Vsx2Q61412 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Gm15321-201ENSMUST00000121290 288 ntBASIC13.33□□□□□ -0.28
Vsx2Q61412 Gm24694-201ENSMUST00000180054 110 ntBASIC13.33□□□□□ -0.28
Vsx2Q61412 Gm27663-201ENSMUST00000184839 110 ntBASIC13.33□□□□□ -0.28
Vsx2Q61412 Gm21470-201ENSMUST00000187680 696 ntBASIC13.33□□□□□ -0.28
Vsx2Q61412 Gm37714-201ENSMUST00000194742 342 ntBASIC13.33□□□□□ -0.28
Vsx2Q61412 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vsx2Q61412 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vsx2Q61412 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.33□□□□□ -0.28
Vsx2Q61412 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Vsx2Q61412 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vsx2Q61412 AC115735.4-201ENSMUST00000227460 1944 ntBASIC13.33□□□□□ -0.28
Vsx2Q61412 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms