Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gm24115-201ENSMUST00000103799 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm22190-201ENSMUST00000103827 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm22191-201ENSMUST00000103831 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm24721-201ENSMUST00000103849 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm28018-201ENSMUST00000103869 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm26399-201ENSMUST00000103937 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Gm25349-201ENSMUST00000177728 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm23616-201ENSMUST00000177797 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm25871-201ENSMUST00000177816 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm24752-201ENSMUST00000178240 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm24496-201ENSMUST00000178287 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm25649-201ENSMUST00000178476 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm25548-201ENSMUST00000178681 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm23147-201ENSMUST00000178841 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm26095-201ENSMUST00000179270 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm22171-201ENSMUST00000179283 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm23936-201ENSMUST00000179354 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm22619-201ENSMUST00000179516 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm25255-201ENSMUST00000179579 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm24755-201ENSMUST00000179691 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm26506-201ENSMUST00000179692 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm25086-201ENSMUST00000179931 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm23243-201ENSMUST00000180047 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm24659-201ENSMUST00000180212 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm24169-201ENSMUST00000180244 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm23689-201ENSMUST00000180354 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm27359-201ENSMUST00000184153 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm27785-201ENSMUST00000184268 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm27466-201ENSMUST00000184396 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm27703-201ENSMUST00000184836 110 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm33320-201ENSMUST00000192232 530 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm43474-201ENSMUST00000196415 774 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC15.13■□□□□ 0.01
Ift88Q61371 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Ift88Q61371 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Fbxo34-205ENSMUST00000168833 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Gm37861-201ENSMUST00000193534 2869 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
Ift88Q61371 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Gm45242-201ENSMUST00000210666 2129 ntBASIC15.13■□□□□ 0.01
Ift88Q61371 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Ift88Q61371 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC15.12■□□□□ 0.01
Ift88Q61371 Rnf40-202ENSMUST00000205694 5279 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Gm24543-201ENSMUST00000103867 82 ntBASIC15.12■□□□□ 0.01
Ift88Q61371 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.12■□□□□ 0.01
Ift88Q61371 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC15.12■□□□□ 0.01
Ift88Q61371 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC15.12■□□□□ 0.01
Ift88Q61371 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Ift88Q61371 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
Ift88Q61371 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Ift88Q61371 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Ift88Q61371 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC15.11■□□□□ 0.01
Ift88Q61371 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC15.11■□□□□ 0.01
Ift88Q61371 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
Ift88Q61371 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Gm44771-201ENSMUST00000206975 626 ntBASIC15.11■□□□□ 0.01
Ift88Q61371 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.11■□□□□ 0.01
Ift88Q61371 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Ift88Q61371 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Ift88Q61371 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Gm45638-201ENSMUST00000211507 2878 ntBASIC15.11■□□□□ 0.01
Ift88Q61371 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Ift88Q61371 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms