Protein–RNA interactions for Protein: Q60688

Foxd4, Forkhead box protein D4, mousemouse

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxd4Q60688 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Foxd4Q60688 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Il15ra-205ENSMUST00000114833 1607 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.25□□□□□ -0.13
Foxd4Q60688 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Foxd4Q60688 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Foxd4Q60688 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Cnbd1-201ENSMUST00000137780 1331 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.24□□□□□ -0.13
Foxd4Q60688 AC162940.1-201ENSMUST00000224745 1167 ntBASIC14.24□□□□□ -0.13
Foxd4Q60688 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Foxd4Q60688 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 AC166491.1-201ENSMUST00000227053 2308 ntBASIC14.24□□□□□ -0.13
Foxd4Q60688 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.24□□□□□ -0.13
Foxd4Q60688 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Foxd4Q60688 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Foxd4Q60688 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC14.23□□□□□ -0.13
Foxd4Q60688 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.23□□□□□ -0.13
Foxd4Q60688 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.23□□□□□ -0.13
Foxd4Q60688 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 5033425B01Rik-201ENSMUST00000213948 1303 ntBASIC14.23□□□□□ -0.13
Foxd4Q60688 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Foxd4Q60688 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Ifna16-201ENSMUST00000105148 1010 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Foxd4Q60688 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.23□□□□□ -0.13
Foxd4Q60688 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Foxd4Q60688 Vmn1r60-201ENSMUST00000173782 1007 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Foxd4Q60688 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.23□□□□□ -0.13
Foxd4Q60688 Gm34816-201ENSMUST00000193363 502 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Foxd4Q60688 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Foxd4Q60688 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Foxd4Q60688 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd4Q60688 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.22□□□□□ -0.13
Foxd4Q60688 Gm38262-201ENSMUST00000194760 1382 ntBASIC14.22□□□□□ -0.13
Foxd4Q60688 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd4Q60688 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Foxd4Q60688 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd4Q60688 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Foxd4Q60688 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd4Q60688 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Foxd4Q60688 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Foxd4Q60688 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms