Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Gm44719-201ENSMUST00000206404 149 ntBASIC16.39■□□□□ 0.21
Vps54Q5SPW0 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vps54Q5SPW0 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Gm30238-201ENSMUST00000195528 2603 ntBASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Ighv5-13-201ENSMUST00000193550 290 ntBASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Gm17870-201ENSMUST00000219489 1174 ntBASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Gm17330-201ENSMUST00000221047 165 ntBASIC16.38■□□□□ 0.21
Vps54Q5SPW0 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Acot6-202ENSMUST00000222921 3622 ntBASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vps54Q5SPW0 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Gm3695-201ENSMUST00000087222 1009 ntBASIC16.37■□□□□ 0.21
Vps54Q5SPW0 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vps54Q5SPW0 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Gm5276-201ENSMUST00000196683 1047 ntBASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Gm8463-201ENSMUST00000208573 613 ntBASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Vps54Q5SPW0 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms