Protein–RNA interactions for Protein: Q5SP85

Ccdc85a, Coiled-coil domain-containing protein 85A, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85aQ5SP85 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc85aQ5SP85 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc85aQ5SP85 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc85aQ5SP85 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc85aQ5SP85 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc85aQ5SP85 Gm10605-202ENSMUST00000183019 3198 ntBASIC15.06■□□□□ 0
Ccdc85aQ5SP85 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Ccdc85aQ5SP85 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC15.05■□□□□ 0
Ccdc85aQ5SP85 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Ccdc85aQ5SP85 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Ccdc85aQ5SP85 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Gm15738-202ENSMUST00000140892 427 ntTSL 2 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Gm26927-201ENSMUST00000182385 965 ntBASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Ccdc85aQ5SP85 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Gm14381-201ENSMUST00000122105 414 ntBASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Gm7029-201ENSMUST00000173226 450 ntBASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 AC153366.2-201ENSMUST00000219461 1984 ntBASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Ccdc85aQ5SP85 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Gm17376-201ENSMUST00000166016 84 ntBASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Gm38144-201ENSMUST00000192790 465 ntBASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Gm37259-201ENSMUST00000193903 849 ntBASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Gm43068-201ENSMUST00000201095 1273 ntBASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 AC131690.1-201ENSMUST00000218406 374 ntBASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Ccdc85aQ5SP85 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms