Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Mir7684-201ENSMUST00000183858 60 ntBASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Mir8102-201ENSMUST00000184148 139 ntBASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Gm27772-201ENSMUST00000184900 187 ntBASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC16.28■□□□□ 0.2
Rnf20Q5DTM8 I730028E13Rik-201ENSMUST00000216012 1959 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 AC154532.1-201ENSMUST00000227860 965 ntBASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Matn2-206ENSMUST00000228570 2798 ntBASIC16.27■□□□□ 0.2
Rnf20Q5DTM8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
Rnf20Q5DTM8 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Gm27838-201ENSMUST00000184829 128 ntBASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC16.26■□□□□ 0.19
Rnf20Q5DTM8 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Gm15770-201ENSMUST00000117498 584 ntBASIC16.25■□□□□ 0.19
Rnf20Q5DTM8 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms