Protein–RNA interactions for Protein: Q52KI8

Srrm1, Serine/arginine repetitive matrix protein 1, mousemouse

Known RBP Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srrm1Q52KI8 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm1Q52KI8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm1Q52KI8 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm1Q52KI8 Slc35e2-201ENSMUST00000043829 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm1Q52KI8 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm1Q52KI8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm1Q52KI8 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm1Q52KI8 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm1Q52KI8 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm1Q52KI8 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Srrm1Q52KI8 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Gm12134-201ENSMUST00000122109 520 ntBASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Gm17376-201ENSMUST00000166016 84 ntBASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Srrm1Q52KI8 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Srrm1Q52KI8 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.27■□□□□ 0.03
Srrm1Q52KI8 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Gm6159-201ENSMUST00000191249 1724 ntBASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Gm6203-201ENSMUST00000209575 1342 ntBASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Gm5687-201ENSMUST00000118252 640 ntBASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Gm12241-201ENSMUST00000118330 726 ntBASIC15.26■□□□□ 0.03
Srrm1Q52KI8 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Gm7029-201ENSMUST00000173226 450 ntBASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Gm25927-201ENSMUST00000175058 117 ntBASIC15.26■□□□□ 0.03
Srrm1Q52KI8 Gm29396-201ENSMUST00000185659 716 ntBASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms