Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Gm8835-201ENSMUST00000173096 1169 ntBASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rc3h1Q4VGL6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rc3h1Q4VGL6 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC15.77■□□□□ 0.11
Rc3h1Q4VGL6 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rc3h1Q4VGL6 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.77■□□□□ 0.11
Rc3h1Q4VGL6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rc3h1Q4VGL6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rc3h1Q4VGL6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rc3h1Q4VGL6 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rc3h1Q4VGL6 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Rc3h1Q4VGL6 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rc3h1Q4VGL6 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Mup-ps23-201ENSMUST00000118063 630 ntBASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Gm44170-201ENSMUST00000203181 549 ntTSL 5 BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rc3h1Q4VGL6 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Ccdc121-201ENSMUST00000058825 1819 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Gm11803-201ENSMUST00000119966 444 ntBASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Mir1982-201ENSMUST00000157368 74 ntBASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Gm27847-201ENSMUST00000183711 107 ntBASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Gm27375-201ENSMUST00000183799 107 ntBASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Gm18473-201ENSMUST00000220543 868 ntBASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Rc3h1Q4VGL6 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Gm13886-201ENSMUST00000117876 1183 ntBASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Gm6152-201ENSMUST00000151704 340 ntBASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Gm24196-201ENSMUST00000179161 110 ntBASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 AC125350.2-201ENSMUST00000224737 727 ntBASIC15.74■□□□□ 0.11
Rc3h1Q4VGL6 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms