Protein–RNA interactions for Protein: Q3TZA2

Cdkl4, Cyclin-dependent kinase-like 4, mousemouse

Predictions only

Length 342 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl4Q3TZA2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl4Q3TZA2 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.69□□□□□ -0.22
Cdkl4Q3TZA2 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl4Q3TZA2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl4Q3TZA2 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdkl4Q3TZA2 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.69□□□□□ -0.22
Cdkl4Q3TZA2 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl4Q3TZA2 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Cdkl4Q3TZA2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 AC155298.2-201ENSMUST00000225485 6226 ntBASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Cdkl4Q3TZA2 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Gm12341-201ENSMUST00000119724 503 ntBASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Gm27772-201ENSMUST00000184900 187 ntBASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Cdkl4Q3TZA2 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Cdkl4Q3TZA2 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms