Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Oard1-202ENSMUST00000167180 1324 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 BC049762-202ENSMUST00000065950 883 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Thegl-201ENSMUST00000031161 1719 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Vav1-204ENSMUST00000169220 2810 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm15506-201ENSMUST00000148776 1133 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm42682-201ENSMUST00000198349 1265 ntBASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 4930555A03Rik-201ENSMUST00000196052 1556 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Glt28d2-201ENSMUST00000033643 2732 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm7719-201ENSMUST00000182374 975 ntBASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Gm37013-201ENSMUST00000194544 313 ntAPPRIS P1 TSL 5 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
Ush2AQ2QI47 Lonp2-207ENSMUST00000163987 1556 ntTSL 1 (best) BASIC7.02□□□□□ -1.28
Ush2AQ2QI47 Gm26013-201ENSMUST00000104404 119 ntBASIC7.02□□□□□ -1.28
Ush2AQ2QI47 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC7.02□□□□□ -1.28
Ush2AQ2QI47 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm8271-201ENSMUST00000171053 1469 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm22594-201ENSMUST00000104251 130 ntBASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 4930483J18Rik-202ENSMUST00000138715 1093 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm25881-201ENSMUST00000157783 103 ntBASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm17796-201ENSMUST00000189015 1213 ntBASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm16380-201ENSMUST00000077997 478 ntBASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Olfr130-201ENSMUST00000087129 954 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Apoe-210ENSMUST00000174710 514 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Rtbdn-202ENSMUST00000109740 1363 ntAPPRIS P2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm42433-201ENSMUST00000196806 940 ntBASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 AC187103.3-201ENSMUST00000225725 646 ntBASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm6430-201ENSMUST00000054664 1248 ntBASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC7.02□□□□□ -1.29
Ush2AQ2QI47 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Crygc-202ENSMUST00000114064 612 ntAPPRIS ALT1 TSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm11619-201ENSMUST00000117474 237 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Bola3-203ENSMUST00000122216 554 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Gm16305-201ENSMUST00000140747 556 ntBASIC7.01□□□□□ -1.29
Ush2AQ2QI47 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC7.01□□□□□ -1.29
Retrieved 100 of 76,532 protein–RNA pairs in 51.1 ms