Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf1Q07802 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf1Q07802 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf1Q07802 Gm8775-201ENSMUST00000170943 1327 ntBASIC13.85□□□□□ -0.19
Ebf1Q07802 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf1Q07802 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.85□□□□□ -0.19
Ebf1Q07802 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Ebf1Q07802 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf1Q07802 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ebf1Q07802 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.85□□□□□ -0.19
Ebf1Q07802 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
Ebf1Q07802 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ebf1Q07802 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Ebf1Q07802 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.84□□□□□ -0.19
Ebf1Q07802 Gm26464-201ENSMUST00000157094 305 ntBASIC13.84□□□□□ -0.19
Ebf1Q07802 Gm24420-201ENSMUST00000176676 59 ntBASIC13.84□□□□□ -0.19
Ebf1Q07802 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Ebf1Q07802 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.84□□□□□ -0.19
Ebf1Q07802 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ebf1Q07802 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC13.84□□□□□ -0.19
Ebf1Q07802 Gm6091-201ENSMUST00000098307 165 ntBASIC13.84□□□□□ -0.19
Ebf1Q07802 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Ebf1Q07802 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Ebf1Q07802 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Ebf1Q07802 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ebf1Q07802 Phf23-209ENSMUST00000153684 1797 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf1Q07802 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
Ebf1Q07802 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf1Q07802 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
Ebf1Q07802 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Ebf1Q07802 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.83□□□□□ -0.2
Ebf1Q07802 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ebf1Q07802 Gm12416-201ENSMUST00000120911 1008 ntBASIC13.83□□□□□ -0.2
Ebf1Q07802 Gm13385-201ENSMUST00000121089 220 ntBASIC13.83□□□□□ -0.2
Ebf1Q07802 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.83□□□□□ -0.2
Ebf1Q07802 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.83□□□□□ -0.2
Ebf1Q07802 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ebf1Q07802 Gm27772-201ENSMUST00000184900 187 ntBASIC13.83□□□□□ -0.2
Ebf1Q07802 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC13.83□□□□□ -0.2
Ebf1Q07802 AC140451.2-201ENSMUST00000228030 664 ntBASIC13.83□□□□□ -0.2
Ebf1Q07802 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Gm10012-201ENSMUST00000078252 192 ntBASIC13.83□□□□□ -0.2
Ebf1Q07802 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.83□□□□□ -0.2
Ebf1Q07802 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Ebf1Q07802 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Ebf1Q07802 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.82□□□□□ -0.2
Ebf1Q07802 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Ebf1Q07802 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Ebf1Q07802 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms