Protein–RNA interactions for Protein: Q02576

Nhlh1, Helix-loop-helix protein 1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlh1Q02576 Gm8566-201ENSMUST00000120174 465 ntBASIC13.54□□□□□ -0.24
Nhlh1Q02576 Gm13813-201ENSMUST00000120998 787 ntBASIC13.54□□□□□ -0.24
Nhlh1Q02576 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC13.54□□□□□ -0.24
Nhlh1Q02576 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.54□□□□□ -0.24
Nhlh1Q02576 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.54□□□□□ -0.24
Nhlh1Q02576 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.54□□□□□ -0.24
Nhlh1Q02576 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Nhlh1Q02576 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Nhlh1Q02576 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Gm23200-201ENSMUST00000104379 132 ntBASIC13.53□□□□□ -0.24
Nhlh1Q02576 Pigp-205ENSMUST00000113917 805 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Gm44262-201ENSMUST00000204969 372 ntBASIC13.53□□□□□ -0.24
Nhlh1Q02576 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Prr15l-202ENSMUST00000062172 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Gas2l2-201ENSMUST00000052521 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Nhlh1Q02576 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nhlh1Q02576 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Nhlh1Q02576 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC13.52□□□□□ -0.24
Nhlh1Q02576 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nhlh1Q02576 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nhlh1Q02576 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nhlh1Q02576 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nhlh1Q02576 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Nhlh1Q02576 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC13.52□□□□□ -0.24
Nhlh1Q02576 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Nhlh1Q02576 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nhlh1Q02576 Gm13611-201ENSMUST00000118269 318 ntBASIC13.52□□□□□ -0.25
Nhlh1Q02576 Gm13665-201ENSMUST00000120830 528 ntBASIC13.52□□□□□ -0.25
Nhlh1Q02576 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
Nhlh1Q02576 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.52□□□□□ -0.25
Nhlh1Q02576 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.52□□□□□ -0.25
Nhlh1Q02576 Gm8385-201ENSMUST00000058999 643 ntBASIC13.52□□□□□ -0.25
Nhlh1Q02576 n-R5s77-201ENSMUST00000083757 119 ntBASIC13.52□□□□□ -0.25
Nhlh1Q02576 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nhlh1Q02576 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nhlh1Q02576 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Nhlh1Q02576 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Nhlh1Q02576 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nhlh1Q02576 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Nhlh1Q02576 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC13.52□□□□□ -0.25
Nhlh1Q02576 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Nhlh1Q02576 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.51□□□□□ -0.25
Nhlh1Q02576 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.51□□□□□ -0.25
Nhlh1Q02576 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Nhlh1Q02576 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 65.7 ms