Protein–RNA interactions for Protein: P97785

Gfra1, GDNF family receptor alpha-1, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra1P97785 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.31□□□□□ -0.6
Gfra1P97785 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC11.31□□□□□ -0.6
Gfra1P97785 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Mir7654-201ENSMUST00000185082 70 ntBASIC11.31□□□□□ -0.6
Gfra1P97785 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC11.31□□□□□ -0.6
Gfra1P97785 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 AC238811.3-201ENSMUST00000225422 709 ntBASIC11.31□□□□□ -0.6
Gfra1P97785 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Gfra1P97785 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC11.31□□□□□ -0.6
Gfra1P97785 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Gm21451-201ENSMUST00000111062 2775 ntBASIC11.31□□□□□ -0.6
Gfra1P97785 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Gfra1P97785 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Gfra1P97785 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Gfra1P97785 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Gfra1P97785 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 AC155298.2-201ENSMUST00000225485 6226 ntBASIC11.3□□□□□ -0.6
Gfra1P97785 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.3□□□□□ -0.6
Gfra1P97785 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.3□□□□□ -0.6
Gfra1P97785 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.3□□□□□ -0.6
Gfra1P97785 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.3□□□□□ -0.6
Gfra1P97785 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC11.3□□□□□ -0.6
Gfra1P97785 Gm9002-201ENSMUST00000178437 499 ntBASIC11.3□□□□□ -0.6
Gfra1P97785 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.3□□□□□ -0.6
Gfra1P97785 Gm19078-201ENSMUST00000206311 727 ntBASIC11.3□□□□□ -0.6
Gfra1P97785 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Gfra1P97785 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gfra1P97785 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Gfra1P97785 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.3□□□□□ -0.6
Gfra1P97785 Gm38037-201ENSMUST00000192600 1624 ntBASIC11.3□□□□□ -0.6
Gfra1P97785 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Gfra1P97785 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.29□□□□□ -0.6
Gfra1P97785 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Gm13859-201ENSMUST00000119936 1423 ntBASIC11.29□□□□□ -0.6
Gfra1P97785 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Gfra1P97785 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC11.29□□□□□ -0.6
Gfra1P97785 Gm2445-201ENSMUST00000182798 989 ntBASIC11.29□□□□□ -0.6
Gfra1P97785 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC11.29□□□□□ -0.6
Gfra1P97785 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC11.29□□□□□ -0.6
Gfra1P97785 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 AC156560.2-201ENSMUST00000221232 264 ntBASIC11.29□□□□□ -0.6
Gfra1P97785 AC155252.1-201ENSMUST00000226462 1208 ntBASIC11.29□□□□□ -0.6
Gfra1P97785 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Gfra1P97785 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 482.7 ms