Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm6473-201ENSMUST00000188572 1210 ntBASIC12.2□□□□□ -0.46
SgcbP82349 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.2□□□□□ -0.46
SgcbP82349 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC12.2□□□□□ -0.46
SgcbP82349 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC12.2□□□□□ -0.46
SgcbP82349 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC12.2□□□□□ -0.46
SgcbP82349 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.2□□□□□ -0.46
SgcbP82349 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC12.2□□□□□ -0.46
SgcbP82349 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC12.2□□□□□ -0.46
SgcbP82349 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
SgcbP82349 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
SgcbP82349 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SgcbP82349 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC12.19□□□□□ -0.46
SgcbP82349 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.19□□□□□ -0.46
SgcbP82349 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.19□□□□□ -0.46
SgcbP82349 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
SgcbP82349 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.19□□□□□ -0.46
SgcbP82349 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.19□□□□□ -0.46
SgcbP82349 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.19□□□□□ -0.46
SgcbP82349 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
SgcbP82349 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
SgcbP82349 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
SgcbP82349 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.18□□□□□ -0.46
SgcbP82349 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Gm26905-201ENSMUST00000180798 6621 ntTSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
SgcbP82349 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
SgcbP82349 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Gm12091-201ENSMUST00000146791 830 ntBASIC12.18□□□□□ -0.46
SgcbP82349 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.18□□□□□ -0.46
SgcbP82349 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC12.18□□□□□ -0.46
SgcbP82349 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Thoc7-209ENSMUST00000225325 765 ntBASIC12.18□□□□□ -0.46
SgcbP82349 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
SgcbP82349 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
SgcbP82349 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
SgcbP82349 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms