Protein–RNA interactions for Protein: P70354

Msx3, Homeobox protein MSX-3, mousemouse

Predictions only

Length 204 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx3P70354 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.06□□□□□ -0.16
Msx3P70354 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Msx3P70354 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Msx3P70354 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Msx3P70354 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
Msx3P70354 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Msx3P70354 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.05□□□□□ -0.16
Msx3P70354 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Msx3P70354 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Msx3P70354 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Msx3P70354 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC14.05□□□□□ -0.16
Msx3P70354 Gm4204-201ENSMUST00000110798 1231 ntBASIC14.05□□□□□ -0.16
Msx3P70354 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Gm15770-201ENSMUST00000117498 584 ntBASIC14.05□□□□□ -0.16
Msx3P70354 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Msx3P70354 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.05□□□□□ -0.16
Msx3P70354 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.05□□□□□ -0.16
Msx3P70354 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.05□□□□□ -0.16
Msx3P70354 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.05□□□□□ -0.16
Msx3P70354 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.05□□□□□ -0.16
Msx3P70354 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Msx3P70354 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.05□□□□□ -0.16
Msx3P70354 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Msx3P70354 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Msx3P70354 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.05□□□□□ -0.16
Msx3P70354 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Msx3P70354 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Msx3P70354 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Msx3P70354 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.04□□□□□ -0.16
Msx3P70354 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC14.04□□□□□ -0.16
Msx3P70354 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Msx3P70354 Gm13730-201ENSMUST00000121036 1462 ntBASIC14.04□□□□□ -0.16
Msx3P70354 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Msx3P70354 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Msx3P70354 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Msx3P70354 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.03□□□□□ -0.16
Msx3P70354 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.03□□□□□ -0.16
Msx3P70354 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms