Protein–RNA interactions for Protein: P63024

Vamp3, Vesicle-associated membrane protein 3, mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp3P63024 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC10.39□□□□□ -0.75
Vamp3P63024 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Vamp3P63024 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Mfsd9-201ENSMUST00000039672 3160 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.38□□□□□ -0.75
Vamp3P63024 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC10.38□□□□□ -0.75
Vamp3P63024 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Vamp3P63024 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Vamp3P63024 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC10.38□□□□□ -0.75
Vamp3P63024 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Gm8344-201ENSMUST00000119813 856 ntBASIC10.38□□□□□ -0.75
Vamp3P63024 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Gm27463-201ENSMUST00000183569 57 ntBASIC10.38□□□□□ -0.75
Vamp3P63024 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Vamp3P63024 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
Vamp3P63024 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC10.38□□□□□ -0.75
Vamp3P63024 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.38□□□□□ -0.75
Vamp3P63024 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC10.38□□□□□ -0.75
Vamp3P63024 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Vamp3P63024 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC10.37□□□□□ -0.75
Vamp3P63024 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Dnaic2-201ENSMUST00000069325 2874 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Vamp3P63024 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC10.37□□□□□ -0.75
Vamp3P63024 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC10.37□□□□□ -0.75
Vamp3P63024 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Hdac7-205ENSMUST00000118294 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Gm38273-201ENSMUST00000194987 2382 ntBASIC10.37□□□□□ -0.75
Vamp3P63024 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Vamp3P63024 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Kbtbd12-202ENSMUST00000120933 4644 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
Vamp3P63024 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.37□□□□□ -0.75
Vamp3P63024 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC10.37□□□□□ -0.75
Vamp3P63024 Gm4217-201ENSMUST00000182243 1002 ntBASIC10.37□□□□□ -0.75
Vamp3P63024 Gm27405-201ENSMUST00000184201 112 ntBASIC10.37□□□□□ -0.75
Vamp3P63024 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Gm18101-201ENSMUST00000215769 548 ntBASIC10.37□□□□□ -0.75
Vamp3P63024 AC164567.1-201ENSMUST00000219185 960 ntBASIC10.37□□□□□ -0.75
Vamp3P63024 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Vamp3P63024 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Ptprm-203ENSMUST00000224091 3773 ntBASIC10.37□□□□□ -0.75
Vamp3P63024 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.37□□□□□ -0.75
Vamp3P63024 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.37□□□□□ -0.75
Vamp3P63024 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Vamp3P63024 Ednrb-203ENSMUST00000227824 2669 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Vamp3P63024 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Vamp3P63024 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Vamp3P63024 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.37□□□□□ -0.75
Vamp3P63024 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Vamp3P63024 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Vamp3P63024 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Vamp3P63024 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC10.36□□□□□ -0.75
Vamp3P63024 CT009757.3-201ENSMUST00000223367 2320 ntBASIC10.36□□□□□ -0.75
Vamp3P63024 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Vamp3P63024 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Vamp3P63024 Raph1-204ENSMUST00000140485 10024 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
Vamp3P63024 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 74.6 ms