Protein–RNA interactions for Protein: P61759

Vbp1, Prefoldin subunit 3, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vbp1P61759 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vbp1P61759 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC12.37□□□□□ -0.43
Vbp1P61759 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Vbp1P61759 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Gm45167-201ENSMUST00000208007 322 ntBASIC12.37□□□□□ -0.43
Vbp1P61759 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Vbp1P61759 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.37□□□□□ -0.43
Vbp1P61759 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.37□□□□□ -0.43
Vbp1P61759 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Incenp-201ENSMUST00000025562 3217 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Ank3-201ENSMUST00000047061 2517 ntTSL 5 BASIC12.37□□□□□ -0.43
Vbp1P61759 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Vbp1P61759 Gm37500-201ENSMUST00000192059 1443 ntBASIC12.37□□□□□ -0.43
Vbp1P61759 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Gm38385-201ENSMUST00000194454 2351 ntBASIC12.36□□□□□ -0.43
Vbp1P61759 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
Vbp1P61759 Erg-201ENSMUST00000077773 2232 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.36□□□□□ -0.43
Vbp1P61759 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Vbp1P61759 Gm12895-201ENSMUST00000122214 226 ntBASIC12.36□□□□□ -0.43
Vbp1P61759 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Gm5479-201ENSMUST00000160578 435 ntBASIC12.36□□□□□ -0.43
Vbp1P61759 Gm6089-201ENSMUST00000197666 938 ntBASIC12.36□□□□□ -0.43
Vbp1P61759 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.36□□□□□ -0.43
Vbp1P61759 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vbp1P61759 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Vbp1P61759 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Vbp1P61759 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Trim23-201ENSMUST00000022225 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Vbp1P61759 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC12.35□□□□□ -0.43
Vbp1P61759 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vbp1P61759 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vbp1P61759 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vbp1P61759 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vbp1P61759 Sp3-202ENSMUST00000102689 4181 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vbp1P61759 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vbp1P61759 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vbp1P61759 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vbp1P61759 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Vbp1P61759 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Vbp1P61759 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms