Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.12□□□□□ -0.31
Sox3P53784 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Sox3P53784 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.12□□□□□ -0.31
Sox3P53784 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Sox3P53784 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Sox3P53784 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sox3P53784 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Sox3P53784 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Sox3P53784 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.12□□□□□ -0.31
Sox3P53784 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.11□□□□□ -0.31
Sox3P53784 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.11□□□□□ -0.31
Sox3P53784 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox3P53784 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Sox3P53784 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Snhg20-201ENSMUST00000145438 459 ntTSL 3 BASIC13.11□□□□□ -0.31
Sox3P53784 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC13.11□□□□□ -0.31
Sox3P53784 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
Sox3P53784 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox3P53784 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Sox3P53784 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Sox3P53784 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Sox3P53784 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox3P53784 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Sox3P53784 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Sox3P53784 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.1□□□□□ -0.31
Sox3P53784 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.1□□□□□ -0.31
Sox3P53784 Gm7172-201ENSMUST00000218047 1152 ntBASIC13.1□□□□□ -0.31
Sox3P53784 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Sox3P53784 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC13.1□□□□□ -0.31
Sox3P53784 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Sox3P53784 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Sox3P53784 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox3P53784 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox3P53784 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox3P53784 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Sox3P53784 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox3P53784 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox3P53784 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Sox3P53784 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox3P53784 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox3P53784 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Sox3P53784 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.09□□□□□ -0.31
Sox3P53784 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Sox3P53784 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC13.09□□□□□ -0.31
Sox3P53784 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms