Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdx1P52946 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
Pdx1P52946 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.24
Pdx1P52946 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Pdx1P52946 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pdx1P52946 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC13.52□□□□□ -0.25
Pdx1P52946 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.52□□□□□ -0.25
Pdx1P52946 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC13.52□□□□□ -0.25
Pdx1P52946 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.52□□□□□ -0.25
Pdx1P52946 Gm44719-201ENSMUST00000206404 149 ntBASIC13.52□□□□□ -0.25
Pdx1P52946 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pdx1P52946 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
Pdx1P52946 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pdx1P52946 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC13.52□□□□□ -0.25
Pdx1P52946 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC13.52□□□□□ -0.25
Pdx1P52946 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Parp3-203ENSMUST00000123555 2495 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Pdx1P52946 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Pdx1P52946 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.51□□□□□ -0.25
Pdx1P52946 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Pdx1P52946 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Pdx1P52946 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdx1P52946 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdx1P52946 Gm7488-201ENSMUST00000117148 684 ntBASIC13.51□□□□□ -0.25
Pdx1P52946 Gm14730-201ENSMUST00000122378 1045 ntBASIC13.51□□□□□ -0.25
Pdx1P52946 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Pdx1P52946 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Gm5866-201ENSMUST00000177881 973 ntBASIC13.51□□□□□ -0.25
Pdx1P52946 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Pdx1P52946 Gm43094-201ENSMUST00000196549 921 ntBASIC13.51□□□□□ -0.25
Pdx1P52946 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.51□□□□□ -0.25
Pdx1P52946 Gm7498-201ENSMUST00000203282 1084 ntBASIC13.51□□□□□ -0.25
Pdx1P52946 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.51□□□□□ -0.25
Pdx1P52946 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Pdx1P52946 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.5□□□□□ -0.25
Pdx1P52946 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Pdx1P52946 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Gm15376-201ENSMUST00000122258 783 ntBASIC13.5□□□□□ -0.25
Pdx1P52946 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC13.5□□□□□ -0.25
Pdx1P52946 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Pdx1P52946 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms