Protein–RNA interactions for Protein: P50404

Sftpd, Pulmonary surfactant-associated protein D, mousemouse

Predictions only

Length 374 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpdP50404 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.4□□□□□ -0.1
SftpdP50404 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
SftpdP50404 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.39□□□□□ -0.11
SftpdP50404 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC14.39□□□□□ -0.11
SftpdP50404 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
SftpdP50404 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC14.39□□□□□ -0.11
SftpdP50404 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.39□□□□□ -0.11
SftpdP50404 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
SftpdP50404 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
SftpdP50404 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
SftpdP50404 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC14.38□□□□□ -0.11
SftpdP50404 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.38□□□□□ -0.11
SftpdP50404 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.38□□□□□ -0.11
SftpdP50404 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC14.38□□□□□ -0.11
SftpdP50404 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC14.38□□□□□ -0.11
SftpdP50404 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC14.38□□□□□ -0.11
SftpdP50404 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.38□□□□□ -0.11
SftpdP50404 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC14.38□□□□□ -0.11
SftpdP50404 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Gm37812-201ENSMUST00000195216 2475 ntBASIC14.38□□□□□ -0.11
SftpdP50404 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
SftpdP50404 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Gm30238-201ENSMUST00000195528 2603 ntBASIC14.38□□□□□ -0.11
SftpdP50404 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
SftpdP50404 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
SftpdP50404 AC159649.2-201ENSMUST00000222984 3223 ntBASIC14.37□□□□□ -0.11
SftpdP50404 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.37□□□□□ -0.11
SftpdP50404 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
SftpdP50404 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
SftpdP50404 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
SftpdP50404 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms