Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC11.32□□□□□ -0.6
Nkx2-1P50220 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC11.32□□□□□ -0.6
Nkx2-1P50220 Gm15483-201ENSMUST00000120338 456 ntBASIC11.32□□□□□ -0.6
Nkx2-1P50220 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Gm5177-201ENSMUST00000183092 997 ntBASIC11.32□□□□□ -0.6
Nkx2-1P50220 Gm27301-201ENSMUST00000184012 127 ntBASIC11.32□□□□□ -0.6
Nkx2-1P50220 Mir8117-201ENSMUST00000184773 107 ntBASIC11.32□□□□□ -0.6
Nkx2-1P50220 Gm5364-201ENSMUST00000216789 889 ntBASIC11.32□□□□□ -0.6
Nkx2-1P50220 AC154572.2-201ENSMUST00000225105 997 ntBASIC11.32□□□□□ -0.6
Nkx2-1P50220 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Mtmr3-201ENSMUST00000040448 5534 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Nkx2-1P50220 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.32□□□□□ -0.6
Nkx2-1P50220 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-1P50220 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Gm15957-201ENSMUST00000118893 974 ntBASIC11.31□□□□□ -0.6
Nkx2-1P50220 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Gm27920-201ENSMUST00000183953 96 ntBASIC11.31□□□□□ -0.6
Nkx2-1P50220 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC11.31□□□□□ -0.6
Nkx2-1P50220 Gm44719-201ENSMUST00000206404 149 ntBASIC11.31□□□□□ -0.6
Nkx2-1P50220 AC159295.1-201ENSMUST00000225326 940 ntBASIC11.31□□□□□ -0.6
Nkx2-1P50220 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Nkx2-1P50220 AC154725.1-201ENSMUST00000224826 1961 ntBASIC11.3□□□□□ -0.6
Nkx2-1P50220 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 AC131586.3-201ENSMUST00000228355 1367 ntBASIC11.3□□□□□ -0.6
Nkx2-1P50220 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Smpd3-201ENSMUST00000067512 5148 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Nkx2-1P50220 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms