Protein–RNA interactions for Protein: P49698

Hnf4a, Hepatocyte nuclear factor 4-alpha, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hnf4aP49698 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.26□□□□□ -0.29
Hnf4aP49698 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.26□□□□□ -0.29
Hnf4aP49698 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Hnf4aP49698 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.26□□□□□ -0.29
Hnf4aP49698 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Hnf4aP49698 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Hnf4aP49698 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Hnf4aP49698 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC13.26□□□□□ -0.29
Hnf4aP49698 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.25□□□□□ -0.29
Hnf4aP49698 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Mir6956-201ENSMUST00000183598 62 ntBASIC13.25□□□□□ -0.29
Hnf4aP49698 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC13.25□□□□□ -0.29
Hnf4aP49698 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.25□□□□□ -0.29
Hnf4aP49698 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC13.25□□□□□ -0.29
Hnf4aP49698 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.25□□□□□ -0.29
Hnf4aP49698 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.25□□□□□ -0.29
Hnf4aP49698 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Hnf4aP49698 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.24□□□□□ -0.29
Hnf4aP49698 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.24□□□□□ -0.29
Hnf4aP49698 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.24□□□□□ -0.29
Hnf4aP49698 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Gm43570-201ENSMUST00000199951 3688 ntBASIC13.24□□□□□ -0.29
Hnf4aP49698 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Gm6912-201ENSMUST00000117218 544 ntBASIC13.24□□□□□ -0.29
Hnf4aP49698 Gm13223-201ENSMUST00000118609 747 ntBASIC13.24□□□□□ -0.29
Hnf4aP49698 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.24□□□□□ -0.29
Hnf4aP49698 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.24□□□□□ -0.29
Hnf4aP49698 Gm24420-201ENSMUST00000176676 59 ntBASIC13.24□□□□□ -0.29
Hnf4aP49698 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Hnf4aP49698 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Hnf4aP49698 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Hnf4aP49698 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.24□□□□□ -0.29
Hnf4aP49698 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms