Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Sox2P48432 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sox2P48432 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.8□□□□□ -0.36
Sox2P48432 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.8□□□□□ -0.36
Sox2P48432 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Gm9727-201ENSMUST00000161387 555 ntBASIC12.8□□□□□ -0.36
Sox2P48432 AA619741-201ENSMUST00000195095 646 ntBASIC12.8□□□□□ -0.36
Sox2P48432 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sox2P48432 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.8□□□□□ -0.36
Sox2P48432 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Sox2P48432 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.8□□□□□ -0.36
Sox2P48432 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
Sox2P48432 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.8□□□□□ -0.36
Sox2P48432 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sox2P48432 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.79□□□□□ -0.36
Sox2P48432 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.79□□□□□ -0.36
Sox2P48432 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Sox2P48432 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sox2P48432 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sox2P48432 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox2P48432 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox2P48432 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Sox2P48432 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sox2P48432 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC12.79□□□□□ -0.36
Sox2P48432 Ssr1-203ENSMUST00000225246 1825 ntBASIC12.78□□□□□ -0.36
Sox2P48432 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sox2P48432 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sox2P48432 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.78□□□□□ -0.36
Sox2P48432 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.78□□□□□ -0.36
Sox2P48432 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.78□□□□□ -0.36
Sox2P48432 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.78□□□□□ -0.36
Sox2P48432 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.78□□□□□ -0.36
Sox2P48432 Gm38225-201ENSMUST00000194001 393 ntBASIC12.78□□□□□ -0.36
Sox2P48432 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Acbd5-208ENSMUST00000226571 3802 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Sox2P48432 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sox2P48432 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms