Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rfx2P48379 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Gm42928-201ENSMUST00000197338 3339 ntBASIC14.32□□□□□ -0.12
Rfx2P48379 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Mir7654-201ENSMUST00000185082 70 ntBASIC14.32□□□□□ -0.12
Rfx2P48379 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC14.32□□□□□ -0.12
Rfx2P48379 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Rfx2P48379 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.32□□□□□ -0.12
Rfx2P48379 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rfx2P48379 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.32□□□□□ -0.12
Rfx2P48379 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 AC154527.2-201ENSMUST00000225256 1466 ntBASIC14.31□□□□□ -0.12
Rfx2P48379 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.31□□□□□ -0.12
Rfx2P48379 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
Rfx2P48379 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC14.31□□□□□ -0.12
Rfx2P48379 Gm8584-201ENSMUST00000171982 758 ntBASIC14.31□□□□□ -0.12
Rfx2P48379 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.31□□□□□ -0.12
Rfx2P48379 Gm28911-201ENSMUST00000188837 117 ntBASIC14.31□□□□□ -0.12
Rfx2P48379 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.31□□□□□ -0.12
Rfx2P48379 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rfx2P48379 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Rfx2P48379 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC14.31□□□□□ -0.12
Rfx2P48379 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Rfx2P48379 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Rfx2P48379 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Rrp1b-201ENSMUST00000081339 4874 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Rfx2P48379 Gm15240-201ENSMUST00000118156 720 ntBASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms