Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.53□□□□□ -0.4
Nkx2-2P42586 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm10327-201ENSMUST00000105222 1002 ntBASIC12.53□□□□□ -0.4
Nkx2-2P42586 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm10576-201ENSMUST00000191927 825 ntBASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm19078-201ENSMUST00000206311 727 ntBASIC12.53□□□□□ -0.4
Nkx2-2P42586 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm7730-201ENSMUST00000212486 454 ntBASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 AC125206.2-201ENSMUST00000217454 574 ntBASIC12.53□□□□□ -0.4
Nkx2-2P42586 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm24447-201ENSMUST00000083977 338 ntBASIC12.53□□□□□ -0.4
Nkx2-2P42586 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.53□□□□□ -0.4
Nkx2-2P42586 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Nkx2-2P42586 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.52□□□□□ -0.4
Nkx2-2P42586 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Nkx2-2P42586 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Matn2-206ENSMUST00000228570 2798 ntBASIC12.52□□□□□ -0.41
Nkx2-2P42586 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Gm12485-201ENSMUST00000119641 291 ntBASIC12.52□□□□□ -0.41
Nkx2-2P42586 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.52□□□□□ -0.41
Nkx2-2P42586 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Gm5354-201ENSMUST00000182417 973 ntBASIC12.52□□□□□ -0.41
Nkx2-2P42586 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Gm5161-201ENSMUST00000075243 853 ntBASIC12.52□□□□□ -0.41
Nkx2-2P42586 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nkx2-2P42586 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.51□□□□□ -0.41
Nkx2-2P42586 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Gm11524-201ENSMUST00000119349 807 ntBASIC12.51□□□□□ -0.41
Nkx2-2P42586 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.51□□□□□ -0.41
Nkx2-2P42586 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.51□□□□□ -0.41
Nkx2-2P42586 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.9 ms