Protein–RNA interactions for Protein: P42581

Hmx3, Homeobox protein HMX3, mousemouse

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmx3P42581 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Tln1-201ENSMUST00000030187 8393 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Kdm5b-201ENSMUST00000047714 8714 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Nr2c2-202ENSMUST00000113463 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Gm12260-201ENSMUST00000122447 411 ntBASIC11.44□□□□□ -0.58
Hmx3P42581 Gm16026-204ENSMUST00000162652 683 ntBASIC11.44□□□□□ -0.58
Hmx3P42581 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC11.44□□□□□ -0.58
Hmx3P42581 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC11.44□□□□□ -0.58
Hmx3P42581 Gm27301-201ENSMUST00000184012 127 ntBASIC11.44□□□□□ -0.58
Hmx3P42581 Gm17968-201ENSMUST00000194902 784 ntBASIC11.44□□□□□ -0.58
Hmx3P42581 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.44□□□□□ -0.58
Hmx3P42581 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC11.44□□□□□ -0.58
Hmx3P42581 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Sema4a-215ENSMUST00000169222 3084 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.44□□□□□ -0.58
Hmx3P42581 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC11.44□□□□□ -0.58
Hmx3P42581 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
Hmx3P42581 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
Hmx3P42581 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC11.44□□□□□ -0.58
Hmx3P42581 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
Hmx3P42581 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.43□□□□□ -0.58
Hmx3P42581 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmx3P42581 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.43□□□□□ -0.58
Hmx3P42581 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.43□□□□□ -0.58
Hmx3P42581 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Gm9385-201ENSMUST00000117563 472 ntBASIC11.43□□□□□ -0.58
Hmx3P42581 Gm8749-201ENSMUST00000117737 331 ntBASIC11.43□□□□□ -0.58
Hmx3P42581 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC11.43□□□□□ -0.58
Hmx3P42581 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC11.43□□□□□ -0.58
Hmx3P42581 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hmx3P42581 Gm45747-201ENSMUST00000212203 999 ntBASIC11.43□□□□□ -0.58
Hmx3P42581 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hmx3P42581 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC11.43□□□□□ -0.58
Hmx3P42581 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Hmx3P42581 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC11.43□□□□□ -0.58
Hmx3P42581 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Crkl-201ENSMUST00000006293 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC11.43□□□□□ -0.58
Hmx3P42581 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.43□□□□□ -0.58
Hmx3P42581 Gm13410-201ENSMUST00000117058 1415 ntBASIC11.43□□□□□ -0.58
Hmx3P42581 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
Hmx3P42581 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.42□□□□□ -0.58
Hmx3P42581 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC11.42□□□□□ -0.58
Hmx3P42581 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 52.9 ms