Protein–RNA interactions for Protein: P42580

Nkx1-2, NK1 transcription factor-related protein 2, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-2P42580 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Gm43575-201ENSMUST00000196420 516 ntBASIC16.82■□□□□ 0.28
Nkx1-2P42580 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.82■□□□□ 0.28
Nkx1-2P42580 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 AC164107.1-201ENSMUST00000227730 2161 ntBASIC16.82■□□□□ 0.28
Nkx1-2P42580 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Nkx1-2P42580 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Gm13730-201ENSMUST00000121036 1462 ntBASIC16.81■□□□□ 0.28
Nkx1-2P42580 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 AC156016.3-201ENSMUST00000228623 344 ntBASIC16.81■□□□□ 0.28
Nkx1-2P42580 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Nkx1-2P42580 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Srms-201ENSMUST00000016498 2562 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Gm10327-201ENSMUST00000105222 1002 ntBASIC16.8■□□□□ 0.28
Nkx1-2P42580 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC16.8■□□□□ 0.28
Nkx1-2P42580 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Gm6736-201ENSMUST00000166583 948 ntBASIC16.8■□□□□ 0.28
Nkx1-2P42580 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Gm33320-201ENSMUST00000192232 530 ntBASIC16.8■□□□□ 0.28
Nkx1-2P42580 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.8■□□□□ 0.28
Nkx1-2P42580 Gm37277-201ENSMUST00000194052 1111 ntBASIC16.8■□□□□ 0.28
Nkx1-2P42580 Rbfox2-208ENSMUST00000227930 1218 ntBASIC16.8■□□□□ 0.28
Nkx1-2P42580 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.8■□□□□ 0.28
Nkx1-2P42580 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Gm15460-201ENSMUST00000118147 391 ntBASIC16.79■□□□□ 0.28
Nkx1-2P42580 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Nkx1-2P42580 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms