Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
TfamP40630 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
TfamP40630 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.26□□□□□ -0.29
TfamP40630 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.26□□□□□ -0.29
TfamP40630 Gm44719-201ENSMUST00000206404 149 ntBASIC13.26□□□□□ -0.29
TfamP40630 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.26□□□□□ -0.29
TfamP40630 Shd-206ENSMUST00000225145 998 ntBASIC13.26□□□□□ -0.29
TfamP40630 AC154806.6-201ENSMUST00000228192 202 ntBASIC13.26□□□□□ -0.29
TfamP40630 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
TfamP40630 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
TfamP40630 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
TfamP40630 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
TfamP40630 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.25□□□□□ -0.29
TfamP40630 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
TfamP40630 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.25□□□□□ -0.29
TfamP40630 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC13.25□□□□□ -0.29
TfamP40630 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
TfamP40630 Gm15460-201ENSMUST00000118147 391 ntBASIC13.25□□□□□ -0.29
TfamP40630 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.25□□□□□ -0.29
TfamP40630 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
TfamP40630 Gm27622-201ENSMUST00000183779 60 ntBASIC13.25□□□□□ -0.29
TfamP40630 AC156016.3-201ENSMUST00000228623 344 ntBASIC13.25□□□□□ -0.29
TfamP40630 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC13.25□□□□□ -0.29
TfamP40630 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.25□□□□□ -0.29
TfamP40630 Grk6-205ENSMUST00000224653 2976 ntBASIC13.25□□□□□ -0.29
TfamP40630 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
TfamP40630 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.25□□□□□ -0.29
TfamP40630 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
TfamP40630 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Gm26525-201ENSMUST00000180666 3616 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Mir698-201ENSMUST00000102164 109 ntBASIC13.24□□□□□ -0.29
TfamP40630 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.24□□□□□ -0.29
TfamP40630 Gm15653-201ENSMUST00000119247 907 ntBASIC13.24□□□□□ -0.29
TfamP40630 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.24□□□□□ -0.29
TfamP40630 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC13.24□□□□□ -0.29
TfamP40630 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Gm27533-201ENSMUST00000183800 152 ntBASIC13.24□□□□□ -0.29
TfamP40630 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
TfamP40630 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
TfamP40630 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
TfamP40630 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
TfamP40630 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms