Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Gm8775-201ENSMUST00000170943 1327 ntBASIC11.27□□□□□ -0.61
Cdkn1aP39689 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn1aP39689 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn1aP39689 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn1aP39689 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn1aP39689 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn1aP39689 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn1aP39689 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Cdkn1aP39689 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm4984-201ENSMUST00000115987 360 ntBASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm15824-201ENSMUST00000119516 955 ntBASIC11.26□□□□□ -0.61
Cdkn1aP39689 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm27839-201ENSMUST00000184242 106 ntBASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm42550-201ENSMUST00000201553 960 ntBASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm6983-201ENSMUST00000214912 628 ntBASIC11.26□□□□□ -0.61
Cdkn1aP39689 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm17794-201ENSMUST00000220252 955 ntBASIC11.26□□□□□ -0.61
Cdkn1aP39689 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm5161-201ENSMUST00000075243 853 ntBASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Cdkn1aP39689 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Cdkn1aP39689 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.25□□□□□ -0.61
Cdkn1aP39689 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Gm20546-201ENSMUST00000173141 1889 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Myo1d-201ENSMUST00000041065 5354 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.25□□□□□ -0.61
Cdkn1aP39689 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Mir1894-201ENSMUST00000122802 81 ntBASIC11.25□□□□□ -0.61
Cdkn1aP39689 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Gm44799-201ENSMUST00000207639 1202 ntBASIC11.25□□□□□ -0.61
Cdkn1aP39689 Gm7067-201ENSMUST00000207698 1249 ntBASIC11.25□□□□□ -0.61
Cdkn1aP39689 Gm8463-201ENSMUST00000208573 613 ntBASIC11.25□□□□□ -0.61
Cdkn1aP39689 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC11.25□□□□□ -0.61
Cdkn1aP39689 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms