Protein–RNA interactions for Protein: P39038

Cdh4, Cadherin-4, mousemouse

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh4P39038 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Cdh4P39038 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdh4P39038 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.1□□□□□ -0.31
Cdh4P39038 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdh4P39038 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC13.1□□□□□ -0.31
Cdh4P39038 Gm7063-201ENSMUST00000186840 981 ntBASIC13.1□□□□□ -0.31
Cdh4P39038 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.1□□□□□ -0.31
Cdh4P39038 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdh4P39038 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Gm19220-201ENSMUST00000222682 803 ntBASIC13.1□□□□□ -0.31
Cdh4P39038 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cdh4P39038 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC13.1□□□□□ -0.31
Cdh4P39038 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cdh4P39038 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.1□□□□□ -0.31
Cdh4P39038 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdh4P39038 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cdh4P39038 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.1□□□□□ -0.31
Cdh4P39038 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cdh4P39038 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Cdh4P39038 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.09□□□□□ -0.31
Cdh4P39038 Iws1-201ENSMUST00000025243 9613 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC13.09□□□□□ -0.31
Cdh4P39038 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Eif3j1-201ENSMUST00000028668 5413 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
Cdh4P39038 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Cdh4P39038 Gm5354-201ENSMUST00000182417 973 ntBASIC13.09□□□□□ -0.31
Cdh4P39038 Gm28631-201ENSMUST00000190740 334 ntBASIC13.09□□□□□ -0.31
Cdh4P39038 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdh4P39038 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC13.09□□□□□ -0.31
Cdh4P39038 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Wdyhv1-206ENSMUST00000227142 786 ntBASIC13.09□□□□□ -0.31
Cdh4P39038 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.09□□□□□ -0.31
Cdh4P39038 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Cdh4P39038 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.08□□□□□ -0.31
Cdh4P39038 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
Cdh4P39038 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
Cdh4P39038 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.08□□□□□ -0.32
Cdh4P39038 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.08□□□□□ -0.32
Cdh4P39038 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.08□□□□□ -0.32
Cdh4P39038 Gm44719-201ENSMUST00000206404 149 ntBASIC13.08□□□□□ -0.32
Cdh4P39038 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Cdh4P39038 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms