Protein–RNA interactions for Protein: P35710

Sox5, Transcription factor SOX-5, mousemouse

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox5P35710 Gm24755-201ENSMUST00000179691 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm26506-201ENSMUST00000179692 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm25086-201ENSMUST00000179931 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm23243-201ENSMUST00000180047 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm24659-201ENSMUST00000180212 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm24169-201ENSMUST00000180244 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm23689-201ENSMUST00000180354 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm27359-201ENSMUST00000184153 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm27785-201ENSMUST00000184268 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm27466-201ENSMUST00000184396 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm27703-201ENSMUST00000184836 110 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gm33320-201ENSMUST00000192232 530 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.94□□□□□ -0.02
Sox5P35710 Ndufaf2-202ENSMUST00000223734 556 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Prss38-201ENSMUST00000061481 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sox5P35710 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.94□□□□□ -0.02
Sox5P35710 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.94□□□□□ -0.02
Sox5P35710 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Sox5P35710 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.94□□□□□ -0.02
Sox5P35710 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC14.94□□□□□ -0.02
Sox5P35710 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Sox5P35710 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Sox5P35710 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Sox5P35710 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Gm24543-201ENSMUST00000103867 82 ntBASIC14.93□□□□□ -0.02
Sox5P35710 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Sox5P35710 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC14.93□□□□□ -0.02
Sox5P35710 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC14.93□□□□□ -0.02
Sox5P35710 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.93□□□□□ -0.02
Sox5P35710 Gm8000-201ENSMUST00000188378 592 ntBASIC14.93□□□□□ -0.02
Sox5P35710 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC14.93□□□□□ -0.02
Sox5P35710 Nectin4-202ENSMUST00000094325 3245 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Sox5P35710 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Sox5P35710 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Sox5P35710 Gm15460-201ENSMUST00000118147 391 ntBASIC14.92□□□□□ -0.02
Sox5P35710 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.92□□□□□ -0.02
Sox5P35710 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sox5P35710 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.92□□□□□ -0.02
Sox5P35710 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Sox5P35710 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
Sox5P35710 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Sox5P35710 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Sox5P35710 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Sox5P35710 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms