Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Mmp13P33435 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.02□□□□□ -0.17
Mmp13P33435 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.17
Mmp13P33435 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Mmp13P33435 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Mmp13P33435 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Mmp13P33435 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC14.01□□□□□ -0.17
Mmp13P33435 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Gm13223-201ENSMUST00000118609 747 ntBASIC14.01□□□□□ -0.17
Mmp13P33435 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Mmp13P33435 Gm14057-201ENSMUST00000120631 482 ntBASIC14.01□□□□□ -0.17
Mmp13P33435 Gm14767-201ENSMUST00000121559 586 ntBASIC14.01□□□□□ -0.17
Mmp13P33435 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.01□□□□□ -0.17
Mmp13P33435 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp13P33435 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp13P33435 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Mmp13P33435 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Gm28386-201ENSMUST00000189147 1849 ntBASIC14.01□□□□□ -0.17
Mmp13P33435 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.01□□□□□ -0.17
Mmp13P33435 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Mmp13P33435 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC14.01□□□□□ -0.17
Mmp13P33435 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Mmp13P33435 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Mmp13P33435 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Mmp13P33435 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14□□□□□ -0.17
Mmp13P33435 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC14□□□□□ -0.17
Mmp13P33435 Gm27533-201ENSMUST00000183800 152 ntBASIC14□□□□□ -0.17
Mmp13P33435 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14□□□□□ -0.17
Mmp13P33435 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14□□□□□ -0.17
Mmp13P33435 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14□□□□□ -0.17
Mmp13P33435 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14□□□□□ -0.17
Mmp13P33435 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14□□□□□ -0.17
Mmp13P33435 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14□□□□□ -0.17
Mmp13P33435 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Gm37861-201ENSMUST00000193534 2869 ntBASIC14□□□□□ -0.17
Mmp13P33435 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC14□□□□□ -0.17
Mmp13P33435 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
Mmp13P33435 Gm9924-202ENSMUST00000192760 2311 ntBASIC13.99□□□□□ -0.17
Mmp13P33435 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Mmp13P33435 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms